From psipred@cs.ucl.ac.uk Tue Aug 21 13:17:01 2007
Date: Tue, 21 Aug 2007 13:15:06 +0100
From: Apache <psipred@cs.ucl.ac.uk>
To: s.lise@ucl.ac.uk
Subject: THIO_ECOLI PSIPRED Results

PSIPRED PREDICTION RESULTS

Key

Conf: Confidence (0=low, 9=high)
Pred: Predicted secondary structure (H=helix, E=strand, C=coil)
  AA: Target sequence

    
# PSIPRED HFORMAT (PSIPRED V2.5 by David Jones)

Conf: 985277476779999982899299999879985689999999999987299599999606
Pred: CCCCEEECHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
  AA: SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI
              10        20        30        40        50        60


Conf: 667688997088305579997099599999758898999999998509
Pred: CCCHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHCC
  AA: DQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA
              70        80        90       100      


Calculate PostScript, PDF and JPEG graphical output for this result using: 
http://bioinf2.cs.ucl.ac.uk/cgi-bin/psipred/gra/nph-view2.cgi?id=3ae15aeda1018e30.psi